06 April 2009

Fascinating Face-banded sesarmine crabs

Boon Peiya shared more insights into these colourful mangrove crabs which I've been seeing on Pulau Semakau and Sungei Buloh recently. First of all, the Face-banded sesarmine crabs are Perisesarma eumolpe and Perisesarma indiarum! The old name was Chiromantes eumolpe.
She also shared photos on how to tell the two species apart.
This is Perisesarma eumolpe.

This is Perisesarma indiarum.

Peiya adds that P. indiarum has a more bluish tinge on the legs compared to P. eumolpe.

Peiya also shared a paper by Huang Huiwen et al which explores the relationship of these colourful face bands to species, sex and size.

In this study, the researchers found that males of both species had more intense blue facial bands, whereas green was more pronounced in female facial bands. These colour differences may play a role in sexual recognition within the species. Bigger females had more intense blue in their facial bands, suggesting that s indicates of their maturity (and possibly body condition). In large males, facial band colours contrast strongly against the surrounding mudflat and may play an important role in signalling to other males during territorial disputes or competition for females.

"Inter- and intra-specific variation in the facial colours of Perisesarma eumolpe and Perisesarma indiarum (Crustacea: Brachyura: Sesarmidae)" by H. Huang, P. A. Todd, D. C. J. Yeo in Hydrobiologia (2008) 598:361–371 DOI 10.1007/s10750-007-9169-z (Abstract on SpringerLink)

From their study I also learnt that Perisesarma crabs eat sediment, leaves of various mangrove trees, green algae and small invertebrates. The study suggests pigments from their food may contribute to their colouration and thus could be an honest signal of an individual’s foraging ability, age or state of health. Indeed, their study found the bands turned grey or black when the crabs are dead. Females with eggs also had duller bands.

In fact, Peiya did a study of what these crabs ate! In the paper by Boon Peiya et al, the researchers found both P. eumolpe and P. indiarum are mainly sediment grazers, but also feed on mangrove leaves and roots and occasionally animals. Both crab species prefer Avicennia alba leaves to other, locally common, mangrove species, i.e., A. officinalis, A. rumphiana, Rhizophora apiculata, Bruguiera gymnorhiza. There is, however, no significant preference for leaves of differing ages in the two species; and no difference in amount of fresh leaves eaten by the two crab species.

A point I found most interesting in Peiya's paper is that the genus Perisesarma comprises one of the highest biomasses of mangrove crabs and play an important ecological role. As they feed on mangrove leaves, they recycle nutrients in the mangrove forest. Quickly breaking down the leaves for others in the food chain to eat, e.g., animals that eat the fragments left over by the crabs, what comes out of the crab after it eats the leaves, and of course, the crab itself!

"Feeding ecology of two species of Perisesarma (Crustacea: Decapoda: Brachyura: Sesarmidae) in Mandai Mangroves, Singapore" by Boon Pei Ya, Darren C. J. Yeo, and Peter A. Todd in Journal of Crustacean Biology, 28(3): 480–484, 2008 (Abstract on BioOne)

I've updated the wild fact sheet on the Face-banded sesarmine crab with the information so kindly shared by Peiya. She adds that it's nice to let Singaporeans know the extent of research being done on our local flora and fauna. I do agree with her and thank her for sharing this information!

05 April 2009

Flowerful day at Pulau Semakau

Back on Pulau Semakau with the Butterfly Circle and Dragonfly teams! And I was given a list of wildflowers to photograph. Since I wasn't sure what the names referred to, I went crazy and took as many wildflowers as I could!Coat buttons (Tridax procumbens) is a commonly seen plant. They belong to the daisy family, and each little 'button' is actually made up of many tiny flowers! These are packed in the centre of the large 'petals' which are actually bracts. The flowers turn into long seeds each with a fluffy parachute (called pappus). It is originally from the tropical Americas but has since made its way to many other places.Purple-leaved button weed (Borreria laevicaulis) is another 'button'-like plant that is commonly seen. It too has its tiny flowers packed into heads. It belongs to the same family as coffee and Ixora plants.Hairy spurge (Euphorbia hirta) also has tiny flowers packed in heads. This commonly seen plant belongs to the same Family as the Rubber tree and its sap contains a latex that is used in traditional medicine. The Chinese use the latex in cooling remedies, in Malaysia and Indonesia it is used to treat conjunctivitis and eye problems. It also has a reputation as a treatment for bronchitis and asthma. It was originally native to Central America.
Asystasia (Asystasia gagetica) is another commonly seen plant. The flowers apparently attract a lot of wasps which damage the blooms. The fruits are capsules that explode when ripe to disperse the seeds.Common snakeweed (Stachytarpheta indica) is a pretty plant that is commonly seen in our wild places. The Malays use the leaves to rub on sprains and bruises, while the Indonesians include the leaves in treatment of dysentery.Touch-me-not (Mimosa pudica) is a delight to children, who are greatly amused by the instant reaction of the leaves which fold up when touched. This habit of 'sleeping' leaves may have resulted in the traditional cure for insomniac children. The plant is included in a bath for the child or a small branch is placed under the child's pillow. The pretty pink flowers don't last very long especially on a hot day. The leaves are also used to treat swellings and wounds and ulcers.Kangkong puteri (Neptunia natans) is a yellow flowered mimosa-looking plant. It is a water plant that grows in water and floats by means of a 'curious white tissue along the stems'. The young stems are eaten as a vegetable (hence the Malay name which means 'Princess kangkong'), and the plant is also used in traditional medicine. I notice the yellow 'flowers' have a huge bunch of what look like stamens hanging on the bottom.
Petai jawa (Leucaena leucocephala) is actually a small tree, and looks like a giant mimosa. Originally from tropical America, the fast-growing tree is often planted for firewood, as a shade tree and for its fruits, which are eaten as a vegetable. It is also used in reforestation in parts of Southeast Asia. Traditional cures include the leaves to treat poisonous bites and stings, the seeds to treat intestinal worms and in a remedy for diabetes.This pretty yellow flowered plant that carpeted the ground, I am unable to find it's ID. This is probably Kachang batang (Macroptilium lathyroides), whose ID I stole off Federick Ho's excellent Beauty of Fauna and Flora in Nature blog. One of the petals of every flower appears to be twisted back. It has long skinny beans.Love-in-a-mist (Passiflora foetida) is a commonly seen vine with pretty but stinky flowers. The fruit is an orange berry held in a basket of moss-like leaves. The berry contains many seeds in a milky pulp and are edible when ripe. But they may contain hydrocyanic acid so don't eat too many.Kachang laut (Canavalia maritima) looks very much like Seashore morning glory (Ipomoea pes-caprae) when both are not flowering as the leaves look very similar and they both creep on sea shores. But they are easy to tell apart from the flowers. The seeds are contained in pods and are edible only after processing as they can contain toxins. Another plant that carpets the shores in succulent branches and leaves is Gelang laut (Sesuvium portulacastrum). 'Gelang laut' means 'garland of the sea' and the long spreading creeping plant does look like a lovely sea shore garland, especially with the tiny pink flowers. Apparently, the flowers close at night or on a cloudy day. In some parts of the world, the succulent is fed to livestock and also eaten as a vegetable.

Despite the very dry theme of the day, I did manage to get my booties wet and have a look at some mangrove trees. So, in keeping with the flowery theme, I also had a closer look at their blooms.These are the lovely flowers of Tengar (Ceriops tagal). The delicate white petals turn brown as they age.And finally, I actually get to see a 'zipped' petal of the Bakau putih (Bruguiera cylindrica). I have been reading about how the stamens are 'enclosed in pairs in a pouched petal' and how the pouch explodes when triggered, dousing pollinators with pollen. I just couldn't figure out what was meant until I saw, today, how two of the petals of this flower were still zipped up! The tassels at the tips of the petals are probably the trigger. Wow, that sure is cool!

Even grasses have amazing flowers. These plants are wind pollinated and thus dangle their bits in the breezes.Some have prickly 'fruits' that stick to our pants legs and annoy and irritate when these get into sensitive spots.And here's a closer look at what is probably some kind of sedge.

While the Butterfly guys found all kinds of butts, my only fluttery success was this large moth that suddenly fell out of a large bush onto the grasses infront of me.
It looks like a Lyssa zampa, the moth that sometimes occurs in large numbers everywhere in Singapore.After a brief struggle in the grasses, it fluttered off into the bushes again.

I had lots of fun today, and although the day ended with lightning and rain and a choppy ride back on the boat, the cheery company and colourful encounters made for a wonderful day out.

References
  • Foo Toik Shiew, 1985. Guide to the Wildflowers of Singapore. Singapore Science Centre. 160 pp.
  • Wee Yeow Chin. 1992. A Guide to Medicinal Plants. The Singapore Science Centre. 160pp
  • Hsuan Keng, S.C. Chin and H. T. W. Tan.1998, The Concise Flora of Singapore II: Monoctyledons Singapore University Press. 215 pp.
  • Burkill, I. H., 1993. A Dictionary of the Economic Products of the Malay Peninsula. 3rd printing. Publication Unit, Ministry of Agriculture, Malaysia, Kuala Lumpur. Volume 1: 1-1240; volume 2: 1241-2444.
  • Tomlinson, P. B., 1986. The Botany of Mangroves. Cambridge University Press. USA. 419 pp.


Also drop by Federick Ho's excellent Beauty of Fauna and Flora in Nature blog for more about our wild flowers and the little animals that live among them.

A special shore tree on Semakau

At first I thought it was just another Sea almond tree, but taking a closer look, I think it might be Guettarda speciosa.
It was my first time seeing this endangered tree!

A spreading shrub or tree (4-10m tall), the leaves really do resemble those of the Sea almond (Terminalia catappa). Indeed, one of the Malay names for it is 'Ketapang pasir' or 'Sea almond of the shore'. But the large tubular flowers and the little round fruits clearly differentiates this tree.
The flowers are said to be fragrant and are said to be pollinated by moths as they open an hour after sunset and fall off the following morning. Indeed, many of the flowers were already doing just that.
But I saw a day-flying moth on a flower!
The fruits are round, green at first turning whitish or pinkish.
They have a hard stone with 4-6 cells, each containing one seed. It is believed that the buoyant fruits are dispersed by water.

The bark is used to treat dysentery as well as applied to wounds. The fragrant flowers were strung into garlands. The timber is used in Fiji for house blocks, although it is considered of little value elsewhere.

This tree is listed as 'Endangered' on the Red List of threatened plants of Singapore. According to Hsuan Keng, it was found on sandy and rocky shores including Pulau Seletar (which is currently facing development). Giesen considers it a mangrove associate.

References
  • Hsuan Keng, S.C. Chin and H. T. W. Tan. 1990, The Concise Flora of Singapore: Gymnosperms and Dicotyledons. Singapore University Press. 222 pp.
  • Davison, G.W. H. and P. K. L. Ng and Ho Hua Chew, 2008. The Singapore Red Data Book: Threatened plants and animals of Singapore. Nature Society (Singapore). 285 pp.
  • Giesen, Wim and Stephan Wulffraat, Max Zieren and Liesbeth Scholten. 2006. Mangrove Guidebook for Southeast Asia (PDF online downloadable). RAP publication 2006/07 Food and Agriculture Organization of the United Nations Regional Office for Asia and the Pacific Bangkok.

Checking up on the Avicennia marina at Semakau

Today, we had a look at the two large Api api jambu (Avicennia marina) trees, which are listed as 'Critically Endangered' on the Red List of threatened plants of Singapore. There are not many mature trees of this species in Singapore.
These trees are about 2-3m tall, and when I last saw them in January, they were quite happy and healthy.
Today, both of them were in full bloom! Every branch seemed to bear flowers!Here's a closer look at the typical bloom: larger flowers crowded at the tips, on squarish stems.Some branches were already bearing fruits.A closer look at the rounded fruits of this tree. Another feature of this special tree is the greenish bark and the very long skinny pneumatophores.

Alas, something seems to be affecting the leaves of both trees.
The young leaves were all curled up and twisted.I don't know what's causing this and hope it doesn't affect the trees too badly.

04 April 2009

Updates on whale shark at Resorts World Sentosa

"Although the feedback we have received till now is not always positive, it shows how concerned everyone is towards the success of the Marine Life Park." stated an undated letter on the Resorts World Sentosa website.

"As of today, over 3,000 of you have written to us and we hope you can spare a few minutes for our side of the story." says Resorts World Sentosa.

There appears to be several petitions on the issue. This petition has 7,100 signatures while this petition has 550 signatures. There is one more petition here, it doesn't display the current count of signatures.

"Last week, we put out a press statement specifying that plans for the Marine Life Park are still being finalized and options are being explored." Are they referring to this post they made dated 12 Mar (which no longer exists on their website)?

"We want to highlight that the whale shark exhibit at the Marine Life Park was submitted as part of the winning bid in an international competition for the Integrated Resort on Sentosa in late 2006. As such, the organization is bound to deliver the integrity of the bid, and any proposed replacement for the whale sharks must be defensible in that it must be viable and be as broad, if not compelling, in its appeal to bring in visitors to Singapore - the reason Singapore decided to have the integrated resorts."

In a radio interview with 92.8Live on 20 Mar, "in response to this, the animal welfare organizations point out that marine parks elsewhere are already excluding captivity and that is the direction Singapore should take."

Louis Ng of Acres said: "If you look, other marine parks in the UK are saying no dolphins in captivity, there are government that are more progressive, who have said, no more dolphins in captivity. And I think we’ve progressed, but we have to progress in the right direction, and not do something other countries are stopping."

Jaki Teo who is behind the Against whale sharks in captivity petition feels although the whale shark exhibit formed part of the winning bid, RWS should explore other ways to attract tourists.

"Granted it was part of the bidding agreement that they have whale sharks, but I’m sure if they had a think about it, there are so many other ways to bring in tourists. If there’s people from different countries, like America and Dubai and even Taiwan and China signing our petition and saying that that’s a bad idea, I don’t think anyone would really believe that it’s for conservation, I think it’s bad for our own image."


The Singapore Tourism Board says in importing animals for the Marine Life Park, RWS will have to comply with international regulations as well as the requirements of the Agri-Food and Veterinary Authority.

AVA said that RWS would have to demonstrate that they have the necessary facilities and infrastructure in place for marine animals.

The facilities must be large enough to house the shark and have a good water maintenance system - and in addition, adequate professional staff, including veterinarians and marine biologists.

Full radio interview and Resorts World Sentosa letter on the wildsingapore news blog.

SPROUT! Environmental workshops with a twist!

Learn new media skills while discovering Singapore’s environment and wildlife.
SPROUT workshopsprogramme to introduce blogging for nature.By the end of the workshops, we hope you will put your new skills to good use: blog about environmental plans you have, photograph rare migatory birds in nature reserves, make a film about the environment and draw super heros to stop global warming!

It is easy to join!

Simply send in a drawing, photograph or write a 100 word BLOG ENTRY on the topic: “SPEAK UP FOR ENV!”

EMAIL your entry together with your NAME, AGE and SCHOOL NAME to post@sproutentry.posterous.com.

Registration will end on 11 May 2009.

More information can be found on sprout09.posterous.com.

Activities:

23 May 2009
Blogging and Photography Workshop at Sungei Buloh Water Reserve
conducted by Mr Sivasothi, Ms Ria Tan, Mr Kenneth Pinto and Ms Colleen Goh

30 May 2009
Film Making Workshop at Pulau Ubin
conducted by Mr Eric Lim

6 June 2009
Comic Drawing and Sketching Workshop at MacRitchie Tree Top Walk
conducted by Mr Arron Teo

In defence of the Red List

"While we at IUCN welcome constructive criticism, we are exasperated by critics who fail to recognise the steady improvements IUCN has been making in trying to present an objective picture of the conservation status of species worldwide, as well as helping to ensure that biodiversity loss is recognised as a crucial issue at the highest political levels." commented IUCN leaders on recent criticisms that the Red List is unscientific and frequently wrong.

They highlight that "it is extremely difficult to raise awareness among decision-makers about the crucial importance of giving attention to all life forms on our planet. Everybody in the conservation movement wants biodiversity to receive the same level of attention as climate change, but this is no easy task. The Red List, thanks to its objectivity and high standards, is one of the very few tools that could allow this to happen."

They add that "the Red List helps to answer many important questions. What is the overall status of biodiversity and how is it changing over time? What is the rate at which biodiversity is being lost? Where is biodiversity being lost most rapidly? What are the main drivers of the loss of biodiversity? What is the effectiveness and impact of conservation activities?"

They also address the criticism is that the list is excessively cautious because it assigns too many species to a category labelled "data deficient". IUCN says that "rather than rushing to a judgement based on poor data, we highlight those species that need more research before an objective decision can be made."

They also argue against faulting the Red List for assigning extinction risk based on how fast a species is declining, rather than on absolute numbers. While this can lead to species such as the green turtle being listed as endangered when there are still more than 2 million individuals, criticising it on these grounds is misleading. Decline is a key indicator of extinction risk. As many conservation experts can attest, there are numerous instances of formerly abundant species declining to extremely low levels very rapidly - think of American bison and passenger pigeons in the past and, more recently, Asian vultures and saiga antelope.

Full article on the wildsingapore news blog.

The Red List in Singapore

03 April 2009

Dredging at Changi Point from Apr to Jun 09

'Maintenance dredging works' will take place just off Changi Point, at the CAFHI Jetty.
And what is the CAFHI Jetty?

I found out it's a fuel hydrant system for Changi Airport set up and operated by six aviation fuel suppliers (Air Total, BP, Caltex, Exxonmobil, Shell and SPC). To "avoid duplication of infrastructure", these suppliers formed the Changi Airport Fuel Hydrant Installation Pte Ltd or CAFHI. The fuel hydrant system includes the fuel jetty, storage tanks, underground pipelines and other infrastructures .

Dredging at the Changi CAFHI Jetty
from Port Marine Notice No. 42 of 2009 dated 2 Apr 09
With effect from 08 Apr 09 to 31 Jun 09. 0700 to 1900 hours daily including Sundays and Public Holidays. At CAFHI Jetty, off berth No.1 (see above plan):

These craft will exhibit the appropriate local and international day and night signals. Maintenance dredging works will be carried out within the working area. The Dredger Barge will be held by 4-point anchor moorings with a safe working zone of a 50-metre radius centred at the Dredger Barge. A safety boat will be deployed 24 hours in the vicinity of the working area to warn craft to keep clear from the on-going dredging works. Further general enquiries relating to the project can be directed to Mr Ang Kong Woon, the Project Coordinator, at Tel: 9626 8813 (email: hs131@singnet.com.sg ).

What is CAFHI?

Parliamentary Debates (PDF)
Monday 16th January, 2006 Volume 80 No. 15, on the NUS website

CHANGI AIRPORT (Provision of aviation fuel)

15. Prof. Ivan Png Paak Liang asked the Minister for Transport what are the commercial arrangements for the provision of aviation fuel at Changi Airport, and in particular (i) who are the concessionaires (ii) how are the concessions awarded; (iii) the duration of the concessions; and (iv) the pricing and conditions of service.

The Minister of State for Transport (Mrs Lim Hwee Hua) (for the Minister for Transport):

Sir, there are currently six aviation fuel suppliers at Changi Airport, namely, Air Total, BP, Caltex, Exxonmobil, Shell and SPC. To avoid duplication of infrastructure at the airport, these suppliers formed a company called Changi Airport Fuel Hydrant Installation Pte Ltd, in short "CAFHI", to construct and operate a single set of fuel hydrant system at Changi Airport.

The fuel hydrant system includes the fuel jetty, storage tanks, underground pipelines and other infrastructures which are shared by these fuel suppliers to store and deliver aviation fuel to their respective airline customers. Although the fuel suppliers share a common infrastructure, they compete independently. Pricing and services provided to airlines by each fuel supplier is contracted separately and airlines are free to engage any one of the six suppliers.

When Changi Airport opened in 1981, CAAS issued CAFHI a 30-year operating licence to operate in Changi Airport. Under this operating licence, which expires in 2011, the consortium is required to ensure the quality of aviation fuel from the fuel suppliers, as well as adhere to the performance standards in the supply of aviation fuel. Although major fuel companies like Shell, Exxonmobil, BP are already represented in Changi Airport, CAAS welcomes competition and any new oil company interested in doing business at Changi can do so by joining this consortium. The admission criteria for new entrants are spelt out in the CAFHI's Heads of Agreement. Any reputable oil company that can meet the admission criteria will be eligible to join the consortium by buying over an equity shareholding from the existing shareholders.

Seashell shapes and patterns: how do snails create them?

A snail creates its own shell and never leaves the shell while alive. The shell continues to grow as the snail gets bigger. And the shell retains its marvellous shape and pattern as it grows. How does the snail do this?

The snail's body (mantle) which overlaps the edge of the growing shell, senses or "tastes" the shell layer laid down the day before in order to generate a new layer. "The pattern on a seashell is the snail's memories."
By adjusting nine parameters in a single equation, a computer model can generate patterned shells (right example in each pair above) that closely resemble real mollusk shells. (Credit: Alistair Boettiger/UC Berkeley)

The complex patterns of seashells have been reproduced by using simple principles developed in a recent study. The researchers' computer model reproduces nearly all known shell shapes and patterns. "The model gives us a remarkable ability to explain much of the dramatic diversity of both shape and pattern that we see in the natural world,"

Studying how snails produce their shells may also help improve understanding of how neural networks function in our brain and where neural nets cover our skin and all internal organs.

Mollusks Taste Memories To Build Shells
ScienceDaily 2 Apr 09;
University of California, Berkeley, graduate student Alistair Boettiger has amassed a beautiful collection of seashells, but not by combing the beach. He created them in his computer.

He and George Oster, a UC Berkeley biophysicist, along with University of Pittsburgh mathematical neuroscientist Bard Ermentrout, have written a computer program that generates the complex patterns of seashells using simple principles developed to explain how the brain works and how memories are stored.

The "neural net" model explains how mollusks build their seashells based on the finding that the mollusk's tongue-like mantle, which overlaps the edge of the growing shell, senses or "tastes" the calcium carbonate layer laid down the day before in order to generate a new layer.

"The pattern on a seashell is the mollusk's memories," said Oster, a professor of environmental science, policy and management and of molecular and cell biology. "The shell is laid down in layers, so the mantle is sensing the history of the mollusk's 'thoughts' and extrapolating to the next layer, just like our brains project into the future."

The studies may help neuroscientists understand how neural networks work in the brain and throughout the body, where neural nets cover our skin and all internal organs.

The researchers' computer model, published this week in the early online edition of the journal Proceedings of the National Academy of Sciences, reproduces nearly all known shell shapes, ranging from scallops to whelks, and nearly all the shell patterns that make beachcombing so popular.

"The model gives us a remarkable ability to explain much of the dramatic diversity of both shape and pattern that we see in the natural world," Boettiger said.

To build their model, the UC Berkeley scientists first studied electron microscope images of mollusk mantles in order to understand the network of neurons connecting the sensing cells in the mantle with the secretory cells that produce calcium carbonate and proteins - many of them colored pigments - incorporated into the growing shell. Different rates of calcium carbonate secretion determine the shape of the spiral, while different amounts of pigment secretion create a pattern unique to each species.

They then modeled the size of the excitatory and inhibitory regions surrounding the secretory cells and the cells' firing thresholds - nine parameters in all - as a neural network that determines how much calcium and pigment is secreted.

Based solely on these nine parameters, Boettiger, Oster and Ermentrout were able to reproduce the shapes and patterns of almost every known sea mollusk.

Interestingly, they found that all shell patterns fall into three basic classes: stripes perpendicular to the growing edge, bands parallel to the growing edge, and complex patterns created by asymmetric "traveling waves" of pigment or calcium deposition.

The basic concept behind the neural net model, which was first described by physicist Ernst Mach in 1865 to explain visual illusions, is that centers of excitation - in the retina, for example - are surrounded by areas of inhibition. Local activation/lateral inhibition applies to many types of neuronal activity and underlies the extreme sensitivity of our eyes and visual system to edges - the activation of cells at an edge inhibits neighboring cells, accentuating the discontinuity.

Famed computer scientist Alan Turing showed in 1952 how local activation/lateral inhibition could work chemically, and biologist Hans Meinhardt used this chemical model to create realistic seashell patterns in the 1970s, which he published in a 1995 book called "The algorithmic beauty of sea shells."

At that time, the neural basis of shell patterning hadn't been widely accepted, though Oster and Ermentrout published an earlier version of the neural model in the 1970s. One problem with Meinhardt's chemical model, which hypothesized reactions among chemicals diffusing through the snail shell, is that it required different chemical reactions to produce each shell pattern.

"Our real contribution is not reproducing the patterns, but showing that the nervous system can do it with one equation based on the principle discovered by Ernst Mach in the 1860s," Oster said.

Striped shells are the easiest to explain with this neural network model. A pigment-secreting cell inhibits secretion of pigment by neighboring cells but not itself, so that the same pattern is repeated day after day, yielding a stripe. Similarly, if one cell pumps up calcium carbonate secretion while depressing secretion by surrounding cells, ridges result. Interestingly, the stripes or ridges split naturally as the shell grows, a mathematical necessity because the size of the inhibition area remains the same as the shell's edge grows.

Bands parallel to the growing edge can be explained by inhibition of future activity. Pigment secreted on one day can inhibit secreting cells for a few days, resulting in an on/off pattern that produces a series of bands.

The most interesting patterns, however, are waves of activity that interfere to produce zigzags, diamonds, chevrons, arrowheads and a host of other shapes. These come about when a pigment inhibits future secretion at that site but excites secretion in surrounding cells. The pigment thus moves laterally on successive days, producing the equivalent of a traveling wave.

Ironically, most sea snails don't care a whit about their shell pattern. They are buried in the mud of the seafloor where their patterns are hidden even from potential mates.

"The pigment is a cue to get the mantle in register so it builds the right shaped shell, and is only an epiphenomenon reflecting neural activity," Oster said. "It is incidental to the snail."

"There is no strong selective pressure to drive patterns, so evolution can explore the entire parameter space" of possible shells, Boettiger added. "That was one rewarding thing about this work; it brought some nice aesthetics to the whole project."

With their success describing shell patterning, Oster plans to move on to his real interest, how cuttlefish rapidly change their patterns in response to the environment. Cuttlefish see a pattern in the environment and alter their skin pattern to blend in, he said, often flickering so rapidly that they resemble an hypnotic strobe.

The work was supported by the National Science Foundation.

02 April 2009

Blue Films

Green Porno goes Blue and does a series of five short clips on the reproductive habits of marine creatures. This follows up on their earlier series on insects.Green Porno is scientifically accurate yet extremely entertaining. Produced by Isabella Rossellini, Jody Shapiro and Rick Gilbert, these delightful clips explore various concepts.

My favourite is about species specific reproductive organs.
Although you might be equally entertained by the humungous organ of the whale, or hermaphrodite behaviour of limpets and the really lame male anglerfish.

View the clips on the Sundance Channel. There's also photos from Green Porno 2 and the Making of Green Porno 2.

You can also get a kick by getting your green porno name: mine is Coral Greencups...hmmm...I wonder what that means?

Mudflat microbes clean up petrochemical pollution

Micro-organisms occurring naturally in coastal mudflats have an essential role in breaking down petrochemical residues. A recent study found that in a healthy marine ecosystem where the water is oxygenated, petrochemical contamination can biodegraded by micro-organisms. But if the oxygen supply is depleted by pollution and other processes leading to the breakdown of organic matter in the soil, the contamination will persist.
Pulau Bukom off Pulau Semakau's mangroves
Mangroves and mudflats of Pulau Semakau
off the petrochemical installations on Pulau Bukom.


"Estuaries are ideal locations for refineries and petrochemical facilities – it is essential that mudflats are preserved to provide a natural clean-up area for pollution" said Dr Efe Aganbi, lead of this research.

Another reason to preserve natural habitats, especially near our industrial areas.

Microbes in mud flats clean up oil spill chemicals
Society for General Microbiology EurekAlert 29 Mar 09;
Micro-organisms occurring naturally in coastal mudflats have an essential role to play in cleaning up pollution by breaking down petrochemical residues.

Research by Dr Efe Aganbi and colleagues from the University of Essex, presented at the Society for General Microbiology's meeting at Harrogate today (Monday 30 April), reveals essential differences in the speed of degradation of the chemicals depending on whether or not oxygen is present.

In aerobic conditions (where oxygen is present), benzene, toluene and naphthalene, which all occur in petroleum, were rapidly degraded by microbes. In the absence of oxygen degradation was slower and only toluene was significantly broken down.

This means that in a healthy marine ecosystem where the water is oxygenated, petrochemical contamination can biodegraded by micro-organisms, but if the oxygen supply is depleted by pollution and other processes leading to the breakdown of organic matter in the soil, the contamination will persist.

While almost all known aromatic hydrocarbons (the petroleum breakdown products) are degraded with oxygen only a few can be completely broken down in the absence of oxygen.

However, in a contaminated environment oxygen is quickly depleted and anaerobic breakdown (without oxygen) becomes an important mechanism for getting rid of contaminants

The scientists also investigated the impact of the three chemicals on the make-up of different estuarine microbial communities.

Over time the types of micro-organisms changed as the compounds were degraded. In aerobic conditions, benzene and toluene did not appear to affect community structure but naphthalene stimulated the growth of Cycloclasticus spirillensus, a bacterium known to break down oil residues. These bacteria might be used as a natural way of cleaning up pollution.

"Our work shows that microbes are very versatile and can live on most types of chemicals" said Dr Aganbi, "More work is needed to identify bacteria in these mud sediments as little is known about the range of bacteria present. Estuaries are ideal locations for refineries and petrochemical facilities – it is essential that mudflats are preserved to provide a natural clean-up area for pollution".

Ancient hermit crabs

The first animals to crawl out of the sea onto land had to figure out how to keep moist. Scientists studying fossils suggest they might have done what hermit crabs do today.
Black hermit crab
Like modern hermit crabs, these ancient pioneers had a scorpion-like body, and could stuff their abdomen into a coiled snail shell. One advantage of doing this was that the shell may have acted as a humid chamber to keep their gills moist.

More about Singapore's hermit crabs (modern ones).

Hermit arthropods 500 million years ago?
ScienceDaily 31 Mar 09;
When animals first crawled onto land, one of the greatest obstacles they had to contend with was figuring out how to breathe. No longer bathed in oxygen-rich marine waters, their gills would surely have dried out.

Hagadorn and Seilacher* have analyzed fossils from 500-million-year-old rocks that show one way these early pioneers may have dealt with this problem--the first terrestrial animals carried a shell on their backs.

Like modern hermit crabs, these ancient pioneers had a scorpion-like body, and could stuff their abdomen into a coiled snail shell. One advantage of doing this was that the shell may have acted as a humid chamber to keep their gills moist.

This would have allowed brief forays out of the water, to explore the beaches and tidal flats, and to graze in environments where there was no competition from other animals or predators.

These fossils represent the first usage of "tools," and provide insights into how some animals may have made the leap from living in water to living on land.

*The article by James W. Hagadorn and Adolf Seilacher, Dept. of Geology, Amherst College, Amherst, Massachusetts 01002, USA was published in the April issue of Geology, Pages 295-298.

01 April 2009

More Sentosa surprises

Every trip to a shore, I discover and learn something new! Though I was just here yesterday with the ITE team, today I see yet MORE stuff as I returned for TeamSeagrass monitoring at Sentosa!During the Spider Survey at Sungei Buloh, David Court expressed interest in any sightings of spiders, especially tarantulas, on our shores. So I was quite excited to see a humungous spider among the debris washed up on the high shores.

Hmm ... I think it's a Huntsman spider (Heteropoda sp.) .
It sure was huge though!

On the natural cliffs of this natural shore, there were large orb webs that were almost invisible. The webs were built parallel to the cliff, and the spider hid off the web in some crevice on the cliff.It does look scary. I have no idea what it might be.

The shores were strewn with the delicate star-shaped flowers of the Sea almond (Terminalia catappa).Indeed, just a few weeks ago, the Sea almond trees painted our coastal forest in autumn shades as their leaves turned red and dropped off. Now, they are blooming!In the early morning, the flowers were still fresh and almost sparkled against the dark green leaves! The male flowers form at the tips of the spike.

As I struggled among the loose rocks and pebbles to have a look at the very special mangrove trees on Sentosa, I came across another very special animal on the rocks.It is the Polished nerite (Nerita polita) which I seldom see. And such a pretty one it was too!
Here's what the underside looks like. It has a very different kind of 'door' (operculum) to the shell opening. The operculum is smooth and not 'pimply' like the other Nerite species more commonly seen on our rocky shores.

Today, I also learnt more about a coastal tree, the Tiup tiup tree (Adinandra dumosa) and took lots of underwater photos of our fabulous seagrasses submerged. What wonderful day out on the shores!

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